Publications

These publications are provided to the academic community for use in teaching and research. All copyrights remain with the appropriate parties as listed in the publications themselves.

My most current publication information is reflected on ResearcherID, GOOGLE Scholar, and ORCID.


Journal Articles

computational modeling

146. P.A. Giolando, K. Hopkins, B. Davis, N Vike, A. Ahmadzadegan, A. Ardekani, P. Vlachos, J. Rispoli, L. Solorio, T. L. Kinzer‐Ursem, “Mechanistic computational modeling of implantable, bioresorbable, drug release systems,” Advanced Materials, 2301698, 2023.

autoinjector design

145. X. Zhong, J.C. Veilleux, G.H. Shi, D.S. Collins, P. Vlachos, A.M. Ardekani, “Hydrodynamic considerations for spring-driven autoinjector design,” International Journal of Pharmaceutics 640, 122975, 2023.

Particle Image micro-Rheology (PIR)

144. A. Ahmadzadegan, H. Mitra, P.P. Vlachos, A.M. Ardekani, “Particle Image micro-Rheology (PIR) using displacement probability density function, Journal of Rheology 67 (4), 823-823, 2023.

suspension of fibers

143. M. Khan, R.V. More, A.A. Banaei, L. Brandt, A.M. Ardekani, “Rheology of concentrated suspension of fibers with load dependent friction coefficient”, Physical Review Fluids 8 (4), 044301, 2023.

Lagrangian stretching

142. M. Kumar, Jeffrey S. Guasto, A.M. Ardekani, “Lagrangian stretching reveals stress topology in viscoelastic flows”, Proceedings of the National Academy of Sciences, 2023.

fiber suspension

141. M. Khan, R.V. More, A.M. Ardekani, “A constitutive model for viscosity of dense fiber suspension,” Physics of Fluids 35 (1), 013337, 2023

autoinjector devices

140. V.D. Sree, X. Zhong, I. Bilionis, A.M. Ardekani, A.B. Tepole “Optimizing autoinjector devices using physics-based simulations and Gaussian processes” Journal of the Mechanical Behavior of Biomedical Materials, 105695, 2023.

ceramic suspensions

139. R.D. Corder, Y.J. Chen, P. Pibulchinda, J.P. Youngblood, A.M. Ardekani, K. Erk, “Rheology of 3D printable ceramic suspensions: effects of non-adsorbing polymer on discontinuous shear thickening”, Soft Matter 19 (5), 882-891, 2023.

Lymphatic uptake

138. D. Han, Chenji Li, V.D. Sree. Aramideh, E. Rahimi A.B. Tepole and A. M. Ardekani “Lymphatic uptake of biotherapeutics through a 3D hybrid discrete-continuum vessel network” Journal of Controlled Release, 2023.

Macromolecular Transport

137. M. H. Hakim, B. H. Jun, A. Ahmadzadegan, P. M. Babiak, Q. Xu, K. P. Buno, J. C. Liu, A. M. Ardekani, P. P. Vlachos, L. Solorio, “Investigation of Macromolecular Transport Through Tunable Collagen Hyaluronic Acid Matrices", Colloids and Surfaces B: Biointerfaces, 2023.

holographic method

136. C.W. Tai, A. Ahmadzadegan, A. M. Ardekani, V. Narsimhan, “A forward reconstruction, holographic method to overcome the lens effect during 3D detection of semi-transparent, non-spherical particles” Soft Matter, 2022.

subcutaneous injection

135. M. de Lucio, Y. Leng, A. Hans, I. Bilionis, M. Brindise, A. M. Ardekani, P. P. Vlachos, H. Gomez, “Modeling large-volume subcutaneous injection of monoclonal antibodies with anisotropic porohyperelastic models and data-driven tissue layer geometries”, Journal of the Mechanical Behavior of Biomedical Materials, 105602, 2022.

Cell Tracking

134. B.H. Jun, A. Ahmadzadegan, A.M. Ardekani, L. Solorio, P.P. Vlachos, “Multi-feature-Based Robust Cell Tracking” Annals of Biomedical Engineering, 1-14, 2022.

Stratified Fluids

133. R.V. More, A.M. Ardekani, Motion in Stratified Fluids, Annual Review of Fluid Mechanics, 55, 2022.

machine learning for Raman

132. M. Boodaghidizaji, S.M. Athalye, S. Thakur, E. Esmaili, M. Verma, A.M. Ardekani, “Characterizing viral samples using machine learning for Raman and absorption spectroscopy” Microbiology Open, 2022.

injection

131. X. Zhong, H. Mitra, J.C. Veilleux, E. Simmons, G.H. Shi, A.M. Ardekani, “The role of liquid rheological properties on the injection process of a spring-driven autoinjector” International Journal of Pharmaceutics 628, 122296, 2022

In vitro measurement of concentration

130. A.C.F. Dos Santos, A. Ahmadzadegan, E. Ximenes, P. Vlachos, A. Ardekani, S. Kapur, V. Corvari, M. R. Ladisch, “In vitro measurement of concentration of unlabeled protein within a hyaluronic acid matrix”, Biotechnology and Bioengineering 119 (12), 3647-3656, 2022.

Viscoelastic instability

129. M. Kumar, A.M. Ardekani, “Viscoelastic instability in an asymmetric geometry”, The European Physical Journal Special Topics, 1-12, 2022.

Viscoelastic instability

128. M Kumar, AM Ardekani, “Hysteresis in viscoelastic flow instability of confined cylinders”, Physical Review Fluids 7 (9), 093302, 2022.

multiphase flows

127. Z. Huang, G. Lin, A.M. Ardekani “Implementing contact angle boundary conditions for second-order Phase-Field models of wall-bounded multiphase flows”, Journal of Computational Physics, 471, 111619, 2022.

hydrodynamic shear

126. J. Eshraghi, Z. Dou, J.C. Veilleux, G. Shi, D. Collins, A. M. Ardekani, P. P. Vlachos, “The air entrainment and hydrodynamic shear of the liquid slosh in syringes,” International Journal of Pharmaceutics 627, 122210, 2022.

subcutaneous injection

125. E. Rahimi, H. Gomez, A. M. Ardekani, “Transport and distribution of biotherapeutics in different tissue layers after subcutaneous injection”, International Journal of Pharmaceutics, 122125, 2022.

microorganisms

124. A. M. Ardekani, “Motile microorganisms in complex fluids”, International Journal of Non-Newtonian Fluid Mechanics, Science Talks 3, 100048, 2022

Spring-Driven Autoinjectors

123. J. Eshraghi, J.C. Veilleux, G. Shi, D. Collins, A. M. Ardekani, P. P. Vlachos, “Assessment of Cavitation Intensity in Accelerating Syringes of Spring-Driven Autoinjectors,” Pharmaceutical Research, 1-15, 2022.

suspension of fibers

122. M. Boodaghidizaji, M. KhanG, A.M. Ardekani “Multi-fidelity modeling to predict the rheological properties of a suspension of fibers using neural networks and Gaussian processes”, Physics of Fluids 34 (5), 053101, 2022.

flow instabilities

121. Sujit S Datta, Arezoo M Ardekani, Paulo E Arratia, Antony N Beris, Irmgard Bischofberger, Jens G Eggers, J Esteban López-Aguilar, Suzanne M Fielding, Anna Frishman, Michael D Graham, Jeffrey S Guasto, Simon J Haward, Sarah Hormozi, Gareth H McKinley, Robert J Poole, Alexander Morozov, V Shankar, Eric SG Shaqfeh, Amy Q Shen, Holger Stark, Victor Steinberg, Ganesh Subramanian, Howard A Stone, “Perspectives on viscoelastic flow instabilities and elastic turbulence”, Physical Review Fluid, 2022.

diffusion

120. A. Ahmadzadegan, J Zhang, A. M. Ardekani, P. P. Vlachos, “Spatiotemporal measurement of concentration-dependent diffusion coefficient,” Physics of Fluids 34 (5), 051910, 2022.

Particle Image Velocimetry

119. A. Ahmadzadegan, S. Bhattacharya, A. M. Ardekani, P. P. Vlachos, “Uncertainty Estimation for Ensemble Particle Image Velocimetry,” Measurement Science and Technology 33 (8), 085302, 2022.

bubble dynamics

118. X. Zhong, A. M. Ardekani, “A model for bubble dynamics in a protein solution”, Journal of Fluid Mechanics, in Press, 2022.

porous media

117. M. Kumar, Jeffrey S. Guasto, A.M. Ardekani, “Transport of complex and active fluids in porous media”, Journal of Rheology, in press, 2022.

phase change

116. Z. Huang, G. Lin, A.M. Ardekani “A consistent and conservative Phase-Field model for thermo-gas-liquid-solid flows including liquid-solid phase change”, Journal of Computational Physics, 449, 110795, 2021.

solar cell electrode

115. M.M. Hilali, S. Pal, R.V. More, R. Saive, A.M. Ardekani, “Sheared Thick-Film Electrode Materials Containing Silver Powders with Nanoscale Surface Asperities Improve Solar Cell Performance”, Advanced Energy and Sustainability Research, 2100145, 2021.

breast cancer spheroids

114. M. Boodaghi, S. Libring, L. Solorio, A.M. Ardekani, “A Bayesian approach to estimate the diffusion coefficient of Rhodamine 6G in breast cancer spheroids”, Journal of Controlled Release, 340, 60-71, 2021.

Viscosity model

113. R. Dandekar, and A. M. Ardekani “A new model to predict viscosity of high concentration monoclonal antibody solutions” Molecular Pharmaceutics, 18 (12), 4385-4392, 2021.

squirmer stratified2

112. V.A. Shaik, A.M. Ardekani, “Squirmer in a density stratified fluid”, Physics of Fluids, 33 (10), 101903, 2021.

Lymphatic uptake

111. D. Han, S. Aramideh, E. Rahimi and A. M. Ardekani “Transport and lymphatic uptake of monoclonal antibodies through subcutaneous injection” Journal of Pharmaceutical Science, accepted, 2021.

spheroid in stratified fluid

110. R.V. More, M.N. Ardekani, L. Brandt, A.M. Ardekani, “Orientation instability of settling spheroids in a linearly density stratified fluid”, Journal of Fluid Mechanics, 929, 2021.

Microswimming

109. G. Li, E. Lauga, A.M. Ardekani, “Microswimming in viscoelastic fluids, Journal of Non-Newtonian Fluid Mechanics, 297, 2021.

108. S.S. Datta, A.M. Ardekani, P.E. Arratia, A.N. Beris, I. Bischofberger, J.G. Eggers, J.E. López-Aguilar, S.M. Fielding, A. Frishman, M.D. Graham, J.S. Guasto, S.J. Haward, S. Hormozi, G.H. McKinley, R.J. Poole, A. Morozov, V. Shankar, E.S.G. Shaqfeh, A.Q. Shen, H. Stark, V. Steinberg, G. Subramanian, H.A. Stone, “Perspectives on viscoelastic flow instabilities and elastic turbulence”, Physical Review Fluid, 2021.

cavitation in AI

107. Y. Zhang, Z. Dou, J.-C. Veilleux, G. H. Shi, D. S. Collins, P. P. Vlachos, S. Dabiri and A. M. Ardekani, “Modeling cavitation bubble dynamics in an autoinjector and its implications to protein molecules” International Journal of Pharmaceutics, 608, 121062, 2021.

freeze thaw

106. R.V. More, A.B. Zhang, A. Ahmadzadegan, S. Dabiri and A.M. Ardekani, “Monitoring heterogeneity in therapeutic samples using Schlieren” International Journal of Pharmaceutics, 121096, 2021.

Lymphatic Uptake of mAb

105. E. Rahimi, S. Aramideh, H. Gomez, A. M. Ardekani, “Transport and Lymphatic Uptake of Monoclonal Antibodies After Subcutaneous Injection”, Microvascular Research, 139, 104228, 2021.

Particles in viscoelastic fluids

104. R. Dandekar, A.M. Ardekani, “Nearly touching spheres in a viscoelastic fluid”, Physics of Fluids, 33 (8), 083112, 2021.

poro-viscoelastic model

103. Y. Leng, A.M. Ardekani, H. Gomez, “A poro-viscoelastic model for the subcutaneous injection of monoclonal antibodies”, Journal of the Mechanics and Physics of Solids, 104537, 2021.

Elastic instabilities between two cylinders

102. M. Kumar, A. M. Ardekani, “Elastic instabilities between two cylinders confined in a channel” Physics of Fluids, 33 (7), 074107, 2021.

volume distribution

101. Z. Huang, G. Lin, A.M. Ardekani “A consistent and conservative volume distribution algorithm and its applications to multiphase flows using Phase-Field models”, International Journal of Multiphase Flow, 103727, 2021.

dense non-Brownian suspensions

100. R. More and, A. M. Ardekani, “Unifying disparate regimes in the flow curve of dense non-Brownian suspensions,” Physical Review E, 103 (6), 062610, 2021.

3 phase 3 components falling drops

99. Z. Huang, G. Lin, A.M. Ardekani “A consistent and conservative model and its scheme for N-phase-M-component incompressible”, Journal of Computational Physics, 434, 110229, 2021.

laser induced cavitation

98. J. Eshraghi, A. M. Ardekani, P. P. Vlachos, “Data assimilation for modeling cavitation bubble dynamics,” Experiments in Fluids, 62 (5), 1-19, 2021.

polymer in porous media

97. M. Kumar, S. Aramideh, C. A. Browne, S. S. Datta, and A. M. Ardekani, “Numerical investigation of multistability in the unstable flow of the polymer solution through porous media”. Physical Review Fluids, 6, 033304, 2021.

sloshing dynamics

95. Y. Zhang, D. Han, Z. Dou, J.-C. Veilleux, G. H. Shi, D. S. Collins, P. P. Vlachos, A. M. Ardekani, “The interface motion and hydrodynamic shear of the liquid slosh in syringes” Pharmaceutical Research, 38, 257–275, 2021.

sloshing dynamics
sloshing dynamics

interaction stratified
interaction stratified

95. R. More and, A. M. Ardekani, “Hydrodynamic interactions between swimming microorganisms in a linearly density stratified fluid”, Physical Review E, 103 (1), 013109, 2021.

94. R. Dandekar, A.M. Ardekani, “Monoclonal Antibody aggregation near silicon oil-water interfaces”, Langmuir, 37, 4, 1386–1398, 2021.

high Pe stratified

93. V.A. Shaik, A.M. Ardekani, “ Far-field flow and drift due to particles and organisms in density-stratified fluids”, Physical Review E, 102 (6), 063106, 2020.

tissue deformation during subQ injection

92. M. de Lucio, M. Bures, A. M. Ardekani, P. P. Vlachos, H. Gomez, “Isogeometric analysis of subcutaneous injection of monoclonal antibodies”, Computer Methods in Applied Mechanics and Engineering, 373, 113550, 2020.

dynamic model

91. X. Zhong, T. Guo, P. P. Vlachos, J.-C. Veilleux, G. H. Shi, D. S. Collins, A. M. Ardekani, “An experimentally validated dynamic model for a spring-driven auto-injector” International Journal of Pharmaceutics, 120008, 2020.

Raman deep learning

90. M. K. Maruthamuthu, A. H. Raffiee, D. M. De Oliveira, Dor Ben-Amotz, A. M. Ardekani, Mohit S. Verma, “Raman spectra-based deep learning – A tool to identify microbial contamination in the pharmaceutical industry”, Microbiology Open, 9 (11), e1122, 2020.

squirmer stratified

89. R. More and, A. M. Ardekani, “Motion of an inertial squirmer in a density stratified fluid”, Journal of Fluid Mechanics, , 905, 2020.

iPED

88. A. Ahmadzadegan, A. M. Ardekani, P. Vlachos, “Estimation of the Probability Density Function of Random Displacements from Images”, Physical Review E, 102, 033305, 2020.

laser induced cavitation

87. X. Zhong, J. Eshraghi, P. P. Vlachos, S. Dabiri, A. M. Ardekani, “A model for a laser-induced cavitation bubble”, International Journal of Multiphase Flow, 103433, 2020.

swimmer in drop

86. A. R. Sprenger, V.A. Shaik, A. M. Ardekani, M. Lisicki, A. J. T. M. Mathijssen, F. Guzman-Lastra, H. Lowen, A. M. Menzel, and A. Daddi-Moussa-Ider, “Towards an analytical description of active microswimmers in clean and in surfactant-covered drops”, European Physical Journal E, 43, 58, 2020.

surfactant laden drop

85. R. Dandekar, A.M. Ardekani, “Migration of a surfactant covered viscous droplet in a Poiseuille flow at low surface P´eclet numbers”, Journal of Fluid Mechanics, 902, A2, 2020.

Continuous manufacturing

84. M. K. Maruthamuthu, S. R. Rudge, A. M. Ardekani, M. R. Ladisch, and M. S. Verma, “Process Analytical Technologies and Data Analytics for Manufacture of Monoclonal Antibodies” Trends in Biotechnology, 38 (10), 1169-1186, 2020.

relative viscosity

83. R. More and, A. M. Ardekani, “A constitutive model for sheared dense suspensions of rough particles”, Journal of Rheology, 64 (5), 1107-1120, 2020.

three-phase Rayleigh-Taylor instability

82. Z. Huang, G. Lin, A.M. Ardekani “Consistent and conservative scheme for incompressible two-phase flows using the conservative Allen-Cahn model”, Journal of Computational Physics, 109718, 2020.

accekeration induced jet formation

81. Y. Zhang, T. Guo, P. P. Vlachos, A. M. Ardekani “Velocity scaling and breakup criteria for jets formed due to acceleration and deceleration process”, Physical Review Fluids, 5 (7), 074003, 2020.

spring-autoinjector

80. Z. Dou, J. Eshraghi, T. Guo, J.-C. Veilleux, K. H. Duffy, G. H. Shi, D. S. Collins, A. M. Ardekani, P. P. Vlachos, “Performance characterization of spring actuated autoinjector devices for Emgality and Aimovig”, Current Medical Research and Opinion 36 (8), 1343-1354.

Swimming sheet in viscosity stratified fluid

79. R. Dandekar, A.M. Ardekani, “Swimming sheet in a viscosity stratified fluid”, Journal of Fluid Mechanics, 895, R2, 2020.

78. N. Kamyabi, R. Abbasgholizadeh, A. Maitra, A. M. Ardekani, S.L. Biswal, K. Jane Grande-Allen “Isolation and mutational assessment of pancreatic cancer extracellular vesicles using a microfluidic platform,” Biomedical Microdevices 22 (2), 1-11, 2020.

settling particle in stratified fluid

77. R. Dandekar, Shaik, A.M. Ardekani, “Motion of an arbitrary shaped particle in a density stratified fluid”, Journal of Fluid Mechanics, 890, A16, 2020.

rising drop in stratified fluid

76. Shaik, A.M. Ardekani, “Drag and deformation of drop in a density stratified fluid”, Physical Review Fluid, 5, 013604, 2020.

shear-thickening suspension

75. R. More, A. M. Ardekani, “Roughness induced shear thickening in frictional non-Brownian suspensions: a numerical study.” Journal of Rheology, 64, 283, 2020.

floating film

74. N. Desai, A.M. Ardekani, “Biofilms at interfaces: microbial distribution in floating films”, Soft Matter, 16 (7), 1705–1944, 2020. (cover article)

Settling disk

73. M. Mercier, S. Wang, J. Péméja, A.M. Ardekani P. Ern “Settling disks in a linearly stratified fluid”, Journal of Fluid Mechanics, 885, 2020.

Rayleigh Taylor Instability

72. Z. Huang, G. Lin, A.M. Ardekani “Consistent, Conservative and Balanced-Force Phase-Field Method to Model Incompressible Two-Phase Flows”, Journal of Computational Physics, 109192, 2019.

sperm extensional flow

71. M. Kumar, Derek M. Walkama, Jeffrey S. Guasto, A.M. Ardekani, “Flow-induced buckling dynamics of sperm flagella,” 100 (6), 063107, 2019.

bacteria near an interface

70. A. Ahmadzadegan, S. Wang, P. Vlachos, A. M. Ardekani, “Hydrodynamic attraction of bacteria to liquid-liquid interfaces”, 100 (6), 062605, 2019.

69. R. More, A. M. Ardekani, “Effect of roughness on the rheology of concentrated non-Brownian suspensions: A numerical study,” Journal of Rheology, 64 (1), 67-80, 2019.

force pattern

68. A.H. Raffiee, A.M. Ardekani, S. Dabiri, “Numerical investigation of elasto-inertial particle focusing patterns in viscoelastic microfluidic devices,” Journal of Non-Newtonian Fluid Mechanics, 272, 104166, 2019.

sperm in shear flow

67. M. Kumar, A.M. Ardekani , “The effect of external shear flow on the sperm motility,” Soft Matter, 2019.

Bayesian

66. 2. P. Naik, P. Pandita, S. Aramideh, I. Bilionis, A. M. Ardekani, “Bayesian model calibration and optimization of surfactant-polymer flooding,” Computational Geosciences, 2019.

swimming sheet stratified

65. R. Dandekar, Shaik, A.M. Ardekani, “Swimming sheet in a density stratified fluid”, Journal of Fluid Mechanics, 874, 210-234, 2019.

non-Newtonian porous

64. S. Aramideh, P. Vlachos, A.M. Ardekani, “Nanoparticle dispersion in porous media in viscoelastic polymer solutions”, International Journal of Non-Newtonian Fluid, 268, 75-80, 2019.

PIV

63. T. Guo, A. M. Ardekani, P. P. Vlachos, “Microscale, scanning defocusing volumetric particle tracking velocimetry”, Experiments in Fluids, 60 (6), 89, 2019.

WENO

62. Z. Huang, G. Lin, A.M. Ardekani “A Mixed Upwind/Central WENO Scheme for the Conservative Form of Two-Phase Navier-Stokes Equations”, Journal of Computational Physics, 387, 455-480, 2019.

nutrient source

61. N. Desai, V. Shaik, A.M. Ardekani, “Hydrodynamics enhances colonization of sinking nutrient sources by motile microorganisms” Frontiers of Microbiology, 2019.

60. V. Shaik, A.M. Ardekani, “Swimming sheet near a plane surfactant laden interface” Physical Review E, 99 (3), 033101, 2019.

cell susspension

59-A.H. Raffiee, S. Dabiri, A.M. Ardekani, “Suspension of cells in Newtonian and viscoelastic fluids in a microchannel,” Microfluidics and Nanofluidics, 23 (2), 22, 2019 (invited article).

History matching

58-P. K. Naik, S. Aramideh, A.M. Ardekani, “History matching of surfactant-polymer flooding using Polynomial Chaos Expansion” Journal of Petroleum Science and Engineering, 173, 1438-1452, 2019.

surfactant and polymer flooding

57-S. Aramideh, P. Vlachos, A.M. Ardekani , “Unstable displacement of Non-Aqueous Phase Liquids with surfactant and polymer” Transport in Porous Media, 126 (2), 455-474, 2019.

Self-Clearing Glaucoma Drainage Device

56-N. H. Lee, H. Park, A. H. Raffiee, S. John, and A.M. Ardekani, “Towards Smart Self-Clearing Glaucoma Drainage Device”, Microsystems & Nanoengineering, 4 (35), 2018.

Chemotaxis of methanotrophic bacteria

55-N. Desai, S. Dabiri, A.M. Ardekani, “Chemotaxis by methanotrophic bacteria in the presence of a rising swarm of oil drops”, International Journal of Multiphase Flow, 2018.

hydrodynamics and chemotaxis

54-N. Desai, A.M. Ardekani, “Combined influence of hydrodynamics and chemotaxis in the distribution of microorganisms around spherical nutrient sources”, Physical Review E, 98, 012419, 2018.

porous media

53-S. Aramideh, P. Vlachos, A.M. Ardekani, “Spatial velocity fluctuations in flow through porous media”, Physical Review E, 98 (1), 013104, 2018.

Locomotion in surfactant-laden-drop

52-V. Shaik, A.M. Ardekani, “Locomotion inside a surfactant-laden-drop: Small surface Peclet analysis”, Journal of Fluid Mechanics, 851, 187-230, 2018.

51-S. Aramideh, R. Borgohain, P. K. Naik, C.T. Johnston, P. Vlachos, A.M. Ardekani, “ Numerical simulation and uncertainty quantification of surfactant-polymer flooding in sandstones”, Fuel, 228, 418-428, 2018.

flagella in polymer solution

50-Y. Zhang, G. Li, A.M. Ardekani, “Reduced viscosity for flagella moving in a solution of long polymer chains”, Physical Review Fluids, 3, 023101, 2018.

Surfactant Trapping

49-N. Desai, V. Shaik, A.M. Ardekani, “Hydrodynamics-mediated trapping of micro-swimmers near drops”, Soft Matter, 14, 264 - 278, 2018.

Capsule migration

48-A.H. Raffiee, S. Dabiri, A.M. Ardekani, “Elasto-inertial migration of deformable capsules in a microchannel”, Biomicrofluidics, 11, 064113, 2017.

Point force outside drop

47-V. Shaik, A.M. Ardekani, “Point force singularities outside a drop covered with an incompressible surfactant: Image systems and their applications”, Physical Review Fluid, 2, 113606, 2017.

organisms in stratified fluids

46-A.M. Ardekani, A. Doostmohammadi, N. Desai, “Transport of particles, drops, and organisms in density stratified fluids”, Physical Review Fluid, 2 (10), 100503, 2017 (invited article).

45-N. Desai, A.M. Ardekani, “Modeling of active-swimmer-suspensions and their interactions with the environment”, Soft Matter, 13, 6033-6050, 2017 (invited review article).

Capsule deformation

44-A.H. Raffiee, S. Dabiri, A.M. Ardekani, “Deformation and buckling of microcapsules in a viscoelastic fluid”, Physical Review E, 96(3), 032603, 2017.

43-S. Wang, Kevin Ellett, A. M. Ardekani, “Assessing the utility of high-level CO2 storage and utilization resource estimates for CCS system modelling” Energy Procedia, 114, 4658-4665, 2017.

42-V. Shaik, A.M. Ardekani, “Motion of a model swimmer near a weakly deforming interface”, Journal of Fluid Mechanics, 824, 42-73, 2017.

surfactant bubble collision
surfactant bubble collision

41-S. Wang, T. Guo, S. Dabiri, P. Vlachos, A.M. Ardekani, “Effect of surfactant on bubble collisions on a free surface”, Physical Review Fluids, 2, 043601, 2017.

40-S. Wang, J.S. Allen, A.M. Ardekani, “Unsteady particle motion in an acoustic standing wave field”, European Journal of Computational Mechanics, 26, 115-130, 2017.

Swimmer in viscoelastic fluid
Swimmer in shearthinning viscoelastic fluid

39-G. Li, A.M. Ardekani, “Near wall motion of undulatory swimmers in non-Newtonian fluids”, European Journal of Computational Mechanics, 26, 44-60, 2017.

Pair interaction in inertial regime
Pair interaction in inertial regime

38-G. Li, A. Ostace, A.M. Ardekani, “Hydrodynamic interaction of swimming organisms in an inertial regime”, Physical Review E, 94,053104, 2016.

Collective motion in viscoelastic fluid
Collective motion in viscoelastic fluid

37-G. Li, A.M. Ardekani, “Collective motion of microorganisms in a viscoelastic fluid”, Physical Review Letters, 117, 118001, 2016.

Biogenic mixing in stratified fluid
Biogenic mixing in stratified fluid

36-S. Bayareh, S. Dabiri, A.M. Ardekani “Interaction between two drops ascending in a linearly stratified fluid”, European Journal of Mechanics-B/Fluids, 60, 127–136, 2016.

Biogenic mixing in stratified fluid

35-S. Wang, A.M. Ardekani, “Biogenic mixing induced by intermediate Reynolds number swimming in a stratified fluid”, Scientific Reports, 5, 17448, 2015.

Undulatory swimming in non-Newtonian fluids

34-G. Li, A.M. Ardekani, “Undulatory swimming in non-Newtonian fluids”, Journal of Fluid Mechanics Rapids, 784, R4, 2015.

particle migration in viscoelastic channels

33-G. Li, G.H. McKinley, A.M. Ardekani, “Dynamics of particle migration in channel flow of viscoelastic fluids”, Journal of Fluid Mechanics, 785, 486-505, 2015.

Residence time in viscoelastic fluids

32-S.H. Yazdi, A.M. Ardekani, A. Borhan, “Swimming dynamics near a wall in a weakly elastic fluid”, Journal of Nonlinear Science, 25 (5), 1153-1167, 2015. (invited article to special issue of the Journal of Nonlinear Science on “Emergent Collective Behavior: from fish schools to bacterial colonies”).

particles in stratified fluids

31-A. Doostmohammadi, A.M. Ardekani “Suspension of solid particles in a density stratified fluid”, Physics of Fluids, 27, 023302, 2015.

Janus microgels

30-Y. Hu, S. Wang, A. Abbaspourrad, A. M. Ardekani “Fabrication of shape controllable Janus alginate/pNIPAAm microgels via microfluidics technique and off-chip ionic crosslinking”, Langmuir, 31(6), 1885-1891, 2015.

shape-tunable alginate microgels

29-Y. Hu, G. Azadi, A.M. Ardekani “Microfluidic fabrication of shape-tunable alginate microgels: Effect of size and impact velocity”, Carbohydrate Polymers, 120, 38-45, 2015.

28-A. Karimi, D. Karig, A. Kumar, A.M. Ardekani “Interplay of physical mechanisms and biofilm processes: review of microfluidic methods”, Lab on a Chip, 2015.

drops in stratified fluids

27-S. Dabiri, A. Doostmohammadi, S. Bayareh, A.M. Ardekani “Numerical simulation of the buoyant rise of a suspension of drops in a linearly stratified fluid,” International Journal Multiphase Flow, 69, 8–17, 2015.

2D  squirmer in viscoelastic fluids

26-S.H. Yazdi, A.M. Ardekani, A. Borhan “Locomotion of microorganisms near a no-slip boundary in a viscoelastic fluid,” Physical Review E, 90, 043002, 2014.

ellipsoid in stratified fluids

25-A. Doostmohammadi, A.M. Ardekani “Reorientation of elongated particles at density interfaces,” Physical Review E, 90, 033013, 2014.

Squirmers in viscoelastic fluids

24-G. Li, A. Karimi, A.M. Ardekani “Effect of solid boundaries on swimming dynamics of microorganisms in a viscoelastic fluid,” Rheologica Acta, 53(12), 911-926, 2014 (invited paper for special early career issue: Trends and progress in rheology)

Squirmers between walls

23-G. Li, A.M. Ardekani “Hydrodynamic interaction of micro-swimmers near a wall,” Physical Review E, 90, 013010, 2014.

Settling sphere in stratified fluid

22-A. Doostmohammadi, S. Dabiri, A.M. Ardekani, “A numerical study of the dynamics of a particle settling at moderate Reynolds numbers in a linearly stratified fluid,” Journal of Fluid Mechanics, 750, 5-32, 2014.

Natural Convection-based Propulsion

21-M.J. Mercier, A.M. Ardekani, M.R. Allshouse, B. Doyle, T. Peacock, “Self-Propulsion of Immersed Objects via Natural Convection,” Physical Review Letters, 112, 204501, 2014. This work is highlithed on Physical Review Letter website.

Gyrotactic bioconvection at pycnoclines

20-A. Karimi, A.M. Ardekani, “Gyrotactic bioconvection at pycnoclines,” Journal of Fluid Mechanics, 773, 245-267, 2013.

pair particles in stratified fluid pair particles in stratified fluid

19-A. Doostmohammadi, A.M. Ardekani, “Interaction between a pair of particles settling in a stratified fluid,” Physical Review E, Volume 88, 023029, 2013.

18-M. Bayareh, A. Doostmohammadi, S. Dabiri, A.M. Ardekani, “On the rising motion of a drop in stratified fluids,” Physics of Fluids, Volume 25, 103302, 2013.

17-S. Wang, A.M. Ardekani, “Swimming of a model ciliate near an air-liquid interface,” Physical Review E, Volume 87, 063010, 2013.

16-A. Karimi, S.H. Yazdi, A.M. Ardekani, “Hydrodynamic mechanisms of cell and particle trapping in microfluidics,” Biomicrofluidics, Volume 7, 021501, 2013.

biofilm formation in vortical flow

15-S.H. Yazdi, A.M. Ardekani, “Bacterial aggregation and biofilm formation in a vortical flow,” Biomicrofluidics, Volume 6, 044114, 2012.

Inertial Squirmer

14-S. Wang, A.M. Ardekani, “Inertial Squirmer,” Physics of Fluids, Volume 24, 101902, 2012.

limit cycle in viscoelastic vortical flow

13-A.M. Ardekani, E. Gore, “Emergence of a limit cycle for swimming microorganisms in a vortical flow of a viscoelastic fluid,” Physical Review E, Volume 85, 056309, 2012.

Unsteady swimming

12-S. Wang, A.M. Ardekani “Unsteady swimming of small organisms,” Journal of Fluid Mechanics, volume 702, 286-297, 2012.

Swimming at pycnoclines

11-A. Doostmohammadi, R. Stocker, A.M. Ardekani “Low Reynolds number swimming at pycnoclines,” Proceedings of the National Academy of Sciences, Volume 109, 3856-3861, 2012. This work is highlighted on ND College of Engineering news page.

Stratlet

10-A.M. Ardekani, R. Stocker “Stratlets: low Reynolds number point-force solutions in a stratified fluid,” Physical Review Letters, Volume 105, 084502, 2010.

Bead Formation Bead Formation

9-A.M. Ardekani, V. Sharma, G.H. McKinley, “Dynamics of Bead Formation, Filament Thinning, and Breakup in Weakly Viscoelastic Jets,” Journal of Fluid Mechanics, Volume 665, 46-56, 2010.

Deformation of droplet in particulate flow

8-A.M. Ardekani, D.D. Joseph, “Instability of stationary liquid sheets,” Proceedings of the National Academy of Sciences, Volume 106, 13, 4992-4996, 2009.

Collision of sphere in viscoelastic fluid

7-A.M. Ardekani, D.D. Joseph, D. Dunn-Rankin, R.H. Rangel, “Particle-wall collision in a viscoelastic fluid,” Journal of Fluid Mechanics, Volume 633, 475-483, 2009.

Deformation of droplet in particulate flow

6-A.M. Ardekani, S. Dabiri, R.H. Rangel, “Deformation of a droplet in a particulate shear flow,” Physics of Fluids, Volume 21, 093302, 2009.

Collision of general shape objects

5-A.M. Ardekani, S. Dabiri, R.H. Rangel, “Collision of multi-particle and general shape objects in a viscous fluid,” Journal of Computational Physics, Volume 227, 10094-10107, 2008.

4-A.M. Ardekani, R.H. Rangel, D.D. Joseph, “Two spheres in a free stream of a second-order fluid,” Physics of Fluids, Volume 20, Issue 6, 2008.

Collision of a sphere onto a wall

3-A.M. Ardekani, R.H. Rangel, “Numerical investigation of particle-particle and particle-wall collisions in a viscous fluid,” Journal of Fluid Mechanics, Volume 596, 437-466, 2008.

Collision of a sphere onto a wall

2-A.M. Ardekani, R.H. Rangel, D.D. Joseph, “Motion of a sphere normal to a wall in second-order fluid,” Journal of Fluid Mechanics, Volume 587, 163-172, 2007.

1-A.M. Ardekani, R.H. Rangel, “Unsteady motion of two solid spheres in Stokes flow,” Physics of Fluids, Volume 18, Issue 10, 2006.

Archived Conference Proceedings

14. S. Wang, A. M. Ardekani, Kevin Ellett, “Assessing the utility of high-level CO2 storage and utilization resource estimates for CCS system modelling” 13th International Conference on Greenhouse Gas Control Technologies, November 14th - 18th, 2016, Lausanne, Switzerland.

13. S. Wang, A. M. Ardekani, “Vertical transport of particles, drops, and microorganisms in density stratified fluids”, Plenary lecture, VIIIth International Symposium on Stratified Flows, August 29-September 1, 2016, San Diego, California.

12. G. Li, A.M. Ardekani “Collective motion of microorganisms in complex fluids,” Keynote lecture for Thematic Session on Low-Reynolds-Number Flow, The 24th International Congress of Theoretical and Applied Mechanics (ICTAM2016), August 21-26, 2016, Montreal, Canada.

Mixing of viscoelastic fluids Mixing of viscoelastic fluids

11. G. Li, A.M. Ardekani “Mixing of complex fluids in microchannels,” Proceedings of the First Pacific Rim Thermal Engineering Conference, March 13-17, 2016, Hawaii's Big Island, USA.

10. M. Bayareh, S. Dabiri, A.M. Ardekani, “Interaction between a pair of drops ascending in a linearly stratified fluid,” Proceedings of ASME 2013 Fluids Engineering Summer Meeting, July 7-11, 2013, Incline Vilage, Nevada.

9. M. Bayareh, S. Dabiri, A.M. Ardekani, “Ascending motion of droplets in stratified fluids,” International Conference in Multiphase Flows, May 26-31, 2013, Jeju, Korea.

8. S. Wang, A.M. Ardekani “Unsteady swimming of small organisms” The 23rd International Congress of Theoretical and Applied Mechanics (ICTAM2012), August 19-24, 2012, Beijing, China.

7. A. Doostmohammadi, A.M. Ardekani, “Vertical migration of the small organisms in a stratified fluid”, Proceedings of ASME 2012 Fluids Engineering Summer Meeting, July 8-12, 2012, Rio Grande, Puerto Rico.

6. R. Stocker, K. Kindler, A. M. Ardekani, B. Liu, A. Khalili, “Low Reynolds number sinking and swimming at a pycnocline” VII International Symposium on Stratified Flows, August 22-26, 2011, Roma, Italy.

Bead Formation

5. V. Sharma, A.M. Ardekani, G.H. McKinley “‘Beads on a String’ Structures and Extensional Rheometry using Jet Break-up” 5th Pacific Rim Conference on Rheology, August 1-6, 2010, Japan.

4. A.M. Ardekani, V. Sharma, G.H. McKinley “Jetting and breakup of weakly viscoelastic liquids” 16th US National Congress of Theoretical and Applied Mechanics, June 17-July2, 2010, State College, PA.

3. A.M. Ardekani, R. Stocker “Swimming at low Reynolds number in a stratified fluid” 16th US National Congress of Theoretical and Applied Mechanics, June 17-July2, 2010, State College, PA.

2. A.M. Ardekani, R.H. Rangel, J. Garman, D. Dunn-Rankin, D.D. Joseph “Particle-wall interaction in a viscoelastic fluid,” XVth International Congress on Rheology, Aug. 3-8, 2008, Monterey, CA.

1. A.M. Ardekani, S. Dabiri, R.H. Rangel, “A distributed Lagrange multiplier method for the simulation of particulate flow using Finite Volume approach,” 45th AIAA Aerospace Sciences Meeting, Jan. 8-11, 2007, Reno, NV.

Book chapters

Motion of a sphere normal to a wall in second-order fluid (A.M. Ardekani, R.H. Rangel, D.D. Joseph) Potential Flows of Viscous and Viscoelastic Fluids. D.D. Joseph, T. Funada, J. Wang, Cambridge University Press, Chapter 20.15, 2007

Invited Conference Presentations

IC.18-Oil-microbe interactions: role of chemotaxis and hydrodynamics, Keynote lecture, Oil-microbe interactions: role of chemotaxis and hydrodynamics, May 15-18, 2018, Udine, Italy.

IC.17-Collective motion of microorganisms in complex fluids, Keynote lecture, focus session on “Statistical physics of biological systems” at Physics@FOM, January 17, 2017, Veldhoven, Netherland.

IC.16-Settling and Swimming in stratified fluids, Keynote invited presentation, 69th Annual Meeting of the APS Division of Fluid Dynamics, November 20-22, 2016, Portland, Oregon.

IC.15-Vertical transport of particles, drops, and microorganisms in density stratified fluids, Plenary lecture, VIIIth International Symposium on Stratified Flows, August 29-September 1, 2016, San Diego, California.

IC.14-Collective motion of microorganisms in complex fluids, Keynote lecture for Thematic Session on Low-Reynolds-Number Flow, International Congress of Theoretical and Applied Mechanics, August 21-26, 2016, Montreal, Canada.

IC.13-Swimming in density stratified fluids, Invited lecture, International Center for Theoretical Physics, Summer School on Active Matter and Chemotaxis, May 14-25, 2016, Zanjan, Iran.

IC.12-Hydrodynamic interaction of microorganisms in complex fluids, Invited lecture, International Center for Theoretical Physics, Summer School on Active Matter and Chemotaxis, May 14-25, 2016, Zanjan, Iran.

IC.11-Swimming in complex fluids, Invited lecture, International Center for Theoretical Physics, Summer School on Active Matter and Chemotaxis, May 14-25, 2016, Zanjan, Iran.

IC.10-Collective dynamics of active particles, Keynote lecture for workshop on “Seminal Motility Imaging and Modeling”, Institut de Mécanique des Fluides de Toulouse, Toulouse, September 22-23, 2015.

IC.9-Near-wall motion of microorganisms in viscoelastic fluids, Active Fluids session, 12th annual conference on Frontiers in Applied and Computational Mathematics (FACM), New Jersey Institute of Technology, New Jersey, June 5-6, 2015.

IC.8-Near wall motion of a model swimmer in a viscoelastic fluid, SIAM conference on Life Sciences, Charlotte, North Carolina, August 4-7, 2014.

IC.7-Hydrodynamic interaction of swimming microorganisms in complex fluids, Locomotion/Flow-body interactions symposium at SIAM Annual Meeting, Chicago, Illinois, July 7-11, 2014.

IC.6-Near wall motion of a model swimmer in a viscoelastic fluid, Workshop “Active Fluids: New Challenges from Experiments to High-Performance Computing”, Mariehamn, Aland Islands, Finland, May 28-31, 2014.

IC.5-Hydrodynamics of bacterial aggregation, Keynote lecture, focus session on “Statistical physics of biological systems” at Physics@FOM, Veldhoven, Netherland, Jan. 22, 2014.

IC.4-Vertical migration of small organisms in a stratified fluid, AIChE Annual Meeting, Pittsburgh, PA, Oct. 28-Nov. 2, 2012.

IC.3-Bacteria aggregation in a vortical flow, Workshop on the Physics of Bacterial Communities organized by Argonne National Lab and University of Notre Dame, Chicago, Jun. 11-12, 2012.

IC.2-Low Reynolds Number Swimming and Settling in Stratified Fluids, Biolocomotion and BioFluid Dynamics symposium, 48th Annual Technical Meeting of Society of Engineering Sciences, Northwestern University, Evanston, Illinois, Oct. 12-14, 2011.

IC.1-Low Reynolds number swimming in stratified fluids, Workshop on Interdisciplinary Biomedical Research, London, Jul. 18-19, 2011.