C. Gondhalekar, E. Biela, B. Rajwa, E. Bae, V. Patsekin, J. Sturgis, C. Reynolds, I.J. Doh, P. Diwakar, L. Stanker, V. Zorba, X. Mao, R. Russo, and J. Paul Robinson, “Detection of E. coli labeled with metal-conjugated antibodies using lateral-flow assay and laser-induced breakdown spectroscopy”, Analytical and Bioanalytical Chemistry, Vol. 412, No. 6, pp.1291-1301, 2020.
Y. Jung, C. Coronel-Aguilera, I.J. Doh, H.J. Min, T. Lim, B.M. Applegate, and E. Bae, “Design and application of a portable luminometer for bioluminescence detection”, Applied Optics, Vol. 59, No. 3, pp.801-810, 2019.
Y. Jung, Y Heo, J.J. Lee, A. Deering, and E. Bae, “Smartphone-based lateral flow imaging system for detection of food-borne bacteria E. coli O157: H7”, Journal of Microbiological Methods, Vol. 168, 105800, 2019.
I.J. Doh, J. Strugis, D.V. Sarria-Zuniga, R. Pruitt, J. P. Robinson, and, E. Bae, “Generalized spectral light scatter models of diverse bacterial colony morphologies”, Journal of Biophotonics, Vol. 12, No. 12, e201900149, 2019.
I.J. Doh, C. Gondhalekar, V. Patsekin, B. Rajwa, K. Hernandez, E. Bae, and J.P. Robinson, "A Portable Spark-Induced Breakdown Spectroscopic (SIBS) Instrument and its Analytical Performance", Applied Spectroscopy, 0003702819844792, 2019.
Y. Zhou, C. Duan, I.J. Doh, and E. Bae, "Exploring the Utility of 3-D-printed Laboratory Equipment", Applied Sciences, 9, 5, 937, 2019.
H. Kim, B. Rajwa, A. K. Bhunia, J. P. Robinson, and E. Bae, "Development of a multispectral light-scatter sensor for bacterial colonies", Journal of Biophotonics, 10, 5, 634-644, 2017.
H. Kim, Y. Jung, I.J. Doh, R.A. Lozano-Mahecha, B. M. Applegate, and E. Bae, "Smartphone-based low light detection for bioluminescence application", Scientific Reports, 7, 40203, 2017.
H. Kim, O. Awofeso, S.M. Choi, Y. Jung, and E. Bae, "Colorimetric analysis of saliva–alcohol test strips by smartphone-based instruments using machine-learning algorithms", Applied Optics, 56, 1, 84-92, 2017.
H. Kim, I.J. Doh, J. Sturgis, A.K. Bhunia, J.P. Robinson, and E. Bae, “Reflected scatterometry for noninvasive interrogation of bacterial colonies”, Journal of Biomedical Optics, 21, 10, 107004, 2016.
H. Kim, B. Rajwa, A. K. Bhunia, J. P. Robinson, E. Bae, "Development of a multispectral light-scatter sensor for bacterial colonies", Journal of Biophotonics, accepted, 2016.
A. K. Singh, L. Leprun, R. Drolia, X. Bai, H. Kim, A. Aroonnual, E. Bae, K. K. Mishra and A. K. Bhunia , "Virulence Gene-Associated Mutant Bacterial Colonies Generate Differentiating Two-Dimensional Laser Scatter Fingerprints,", Applied and environmental microbiology, Vol.82, pp. 3256-3268, 2016.
E. Bae, H. Kim, B. Rajwa, J. G. Thomas, and J. P. Robinson, "Current status and future prospects of using advanced computer-based methods to study bacterial colonial morphology", Expert Review of Anti-infective Therapy, pp. 1-12, 2016.
Y. Jung, J. Kim, O. Awofeso, H. Kim, F. Regnier, and E. Bae, "Smartphone based colorimetric analysis for detection of saliva alcohol concentration,", Applied Optics, Vol.54, pp. 9183-9189, 2015.
H. Kim, I.J. Doh, A. K. Bhunia, G. B. King, and E. Bae, "Scalar diffraction modeling of multispectral forward scatter patterns from bacterial colonies", Optics Express 23, 8545, 2015.
A. K. Singh, X. Sun, X. Bai, Huisung Kim, M. U. Abdalhaseib, E. Bae, and A. K. Bhunia, "Label-free, non-invasive light scattering sensor for rapid screening of Bacillus colonies", Journal of Microbiological Methods 109, 5666, 2015.
H. Kim, A. K. Singh, A. K. Bhunia, and E. Bae, "Laser-induced speckle scatter patterns in Bacillus colonies", Frontiers in Microbiology, Food Microbiology, vol. 5, pp. 537, 2014.
Y. Tang, H. Kim, A. K. Singh, A. Aroonnual, E. Bae, B. Rajwa, P. M. Fratamico, and A. K. Bhunia, "Light Scattering Sensor for Direct Identification of Colonies of Escherichia coli Serogroups O26, O45, O103, O111, O121, O145 and O157", PLoS ONE, vol. 9, no. 8, pp. e105272, Aug. 2014.
I.H. Cho, A. Radadia, K. Farrokhzad, E. Ximenes, E. Bae, A.K Singh, H. Oliver, M. Ladisch, A.K. Bhunia, B. Applegate, L. Mauer, R. Bashir, and J. Irudayaraj, "Nano/micro and spectroscopic approaches to food pathogen detection", Annual review of analytical chemistry, 7, 2014.
A. Singh, A. M Bettasso, E. Bae, B. Rajwa, M.M. Dundar, M. Forster, L. Liu, B. Barrett, J.C. Lovchik, J.P. Robinson, and A.K. Bhunia "A Laser Optical Sensor based Detection and Classification of Salmonella serovars from Food", mbio, 5, 2014.
H. Kim, N. Bai, A.K. Bhunia, G.B. King, E.D. Hirleman, and E. Bae "“Development of an integrated optical analyzer for characterization of growth dynamics of bacterial colonies”, Journal of Biophotonics,Vol. 6, No. 11-12, pp. 929-937, 2013.
M. Mialon, Y Tang, A.K. Singh, E. Bae, and A.K. Bhunia, "Effects of preparation and storage of agar media on the sensitivity of bacterial forwrard scattering patterns", Open Journal of Applied Biosensor, Vol. 1, No 3, pp.26-35, 2012.
E. Bae, D. Ying, D. Kramer, V. Patsekin, B. Rajwa, C. Holdman, J. Sturgis, V.J. Davisson, and J.P. RobinsonPortable bacterial identification systems based on elastic light scatter patterns, Journal of Biological Engieernig, in progress, 2012.
K. Huff, P. Banada, A. Aroonnual, E. Bae, B. Bayraktar, B. Rajwa, E.D. Hirleman, J.P. Robinson, G. P. Richards, and A.K. Bhunia “Detection and identification of Vibrio species using a novel optical forward light scattering sensor”, Journal of Clinical Microbiology, Vol. 5, No 5, pp. 607-620, 2012.
E. Bae, Huisung Kim, Helen A. Mcnally, Arun K. Bhunia, and E.D. Hirleman“Investigation of the presensce of rod-shaped bacteria on food surface via elastic light scattering”, Advance in Bioscience and Biotechnology, Vol. 3, No 4, pp. 344-352, 2012.
E. Bae, V. Patsekin, B. Rajwa, A.K. Bhunia, C. Holdman, V.J. Davisson, E.D. Hirleman, and J.P. Robinson “Development of a microbial high-throughput screening instrument based on elastic light scatter patterns, Review of Scientific Instruments, Vol. 83, 044304, 2012.
J.P. Robinson, B.P. Rajwa, E. Bae, V.Patsekin, A.M. Roumani, A.K. Bhunia, J.E. Dietz, V.J. Davisson, M.M. Dundar, J. Thomas, and E.D. Hirleman “Using Scattering to identify Bacterial Pathogens, Optics and Photonics News, Vol.22, No.10, pp.20-27, 2011.
E. Bae, N. Bai, and E.D. Hirleman Application of sampling criterion on numerical diffraction from bacterial colonies, Applied Optics, Vol.50, No.15, pp.2228-2238, 2011.
E. Bae, A. Aroonnual, A.K. Bhunia, and E.D. Hirleman “On the sensitivity of forward scattering patterns from bacterial colonies to media composition”, Journal of Biophotonics, Vol.4, No.4, pp.236-243, 2011.
E. Bae, N. Bai, A. Aroonnual, A.K. Bhunia, and E.D. Hirleman Label-free identification of bacterial microcolonies via elastic scattering”, Biotechnology and Bioengineering, Vol. 108, No. 3, pp.637-644, 2011.
E. Bae, N. Bai, A. Aroonnual, A.K. Bhunia, J.P. Robinson, and E.D. Hirleman Modeling the propagation of light through bacterial colonies and their correlation to the forward scattering patterns”, Journal of Biomedical Optics, Vol. 15, 019004, 2010.
E. Bae, A. Aroonnual, A.K. Bhunia, J.P. Robinson, and E.D. Hirleman System automation for a bacterial colony detection and identification instrument via forward scattering”, Measurement Science and Technology, Vol. 20, 015802, 2009.
E. Bae, and E.D. Hirleman, Computational analysis and diagonal preconditioning for the discrete dipole approximation on surface”, Journal of Quantitative Spectroscopy and Radiative Transfer, Vol. 110, pp.51-61, 2009.
11.
P.P. Banada, K. Huff, Amornrat Aroonnual, E. Bae, B. Rajwa, B. Bayraktar, A. Adil, J.P. Robinson, E.D. Hirleman, and A.K. Bhunia, “Label-free detection of multiple bacterial pathogens using light scattering sensor”, Biosensors and Bioelectronics, Vol. 24, pp.1685-1692, 2009.
E. Bae, H. Zhang, and E.D. Hirleman, Application of discrete dipole approximation for dipoles embedded in film”, Journal of Optical Society of America A, Vol. 25, No. 7, pp.1728-1736, 2008.
E. Bae, P.P. Banada, K. Huff, A.K. Bhunia, J.P. Robinson, and E.D. Hirleman, “Analysis of time-resolved scattering from macroscale bacterial colonies”, Journal of Biomedical Optics, Vol. 13, 014010, 2008.
E. Bae, and E.D. Hirleman, “Extending the applicability of the discrete dipole approximation for multi-scale features on surface”, Journal of Quantitative Spectroscopy and Radiative Transfer, Vol. 107, pp.470-478, 2007.
E. Bae, P.P. Banada, K. Huff, A.K. Bhunia, J.P. Robinson, and E.D. Hirleman, “Biophysical modeling of forward scattering from bacterial colonies using scalar diffraction theory”, Vol. 46, No. 17, pp.3639-3648, 2007.
P.P. Banada, S. Guo, B.Bayraktar, E. Bae, B. Rajwa, J.P. Robinson, E.D. Hirleman, and A.K Bhunia, “Optical forward-scattering for detection of Listeria monocytogenes and other Listeria species”, Biosensors and Bioelectronics, 22, 1664-1671, 2007.
J.Kim, E.W. Bae, S.H.Kim, and Y.K. Kwak, “Design methods for six-degree-of-freedom displacement measurement systems using cooperative targets”, Precision Engineering, Vol.26, No. 1, pp.99 - 104, 2002.
E.W. Bae, J.Kim, and S.H Kim, Multi-degree-of-freedom displacement measurement system for milli-structures”, Measurement Science and Technology, Vol.12, No. 9, pp.1495 - 1502, 2001.
J.Kim, E.W. Bae, and S.H Kim, Application of sensitivity analysis for the design of six-degree-of-freedom measurement system, Optical Engineering, Vol.40, No. 12, pp.2837 - 2844, 2001.
J.Kim, E.W. Bae, and S.H Kim, Multidimensional motion measurement of a bimorph-type piezoelectric actuator using a diffraction grating target”, Review of Scientific Instrument, Vol.72, No. 9, pp.3731 - 3733, 2001.
J.A. Kim, K.C. Kim, E.W. Bae, S.H. Kim, and Y.K. Kwak, Six Degree of Freedom Displacement Measurement System Using a Diffraction Grating”, Review of Scientific Instrument, Vol. 71, No. 8, pp. 3214-3219, 2000.
Conference
C. Gondhalekar, E. Biela, B. Rajwa, E. Bae, V. Patsekin, J. Sturgis, H.Kim, I.J. Doh, P. Diwakar, L. Stanker, V. Zorba, R. Russo, X. Mao, and J. Paul Robinson, "Pairing atomic spectroscopy with multiplexed immunoassays for rapid portable antigen detection", Recent Advance in Food Analysis (RAFA), Prague, Czech Republic, 2019.
I.J. Doh, J. Sturgis, D.V. Sarria-Zuniga, V. Patsekin, B. Rajwa, R. Pruitt, J. Paul Robinson, and E. Bae, "Light scattering phenotyping from bacterial colonies by supercontinuum laser", Recent Advance in Food Analysis (RAFA), Prague, Czech Republic, 2019.
H.J. Min, X. Wang, I.J. Doh, B.M. Applegate, A. Deering, J. Paul Robinson, and E. Bae, "Smartphone-based portable instruments for food safety application", Recent Advance in Food Analysis (RAFA), Prague, Czech Republic, 2019.
C. Gondhalekar, E. Biela, B. Rajwa, E. Bae, V. Patsekin, J. Sturgis, H.Kim, I.J. Doh, P. Diwakar, L. Stanker, V. Zorba, R. Russo, X. Mao, and J. Paul Robinson, "Detecting lanthanide- and gold-labeled E.coli using LIBS: applications in public health and biowarfare defense", SCIX 2019, Palm Springs, California, 2019.
E. Bae, S.M. Muddabir, and M. C. Aime, “Development of a machine learning-based mushroom app for real-time image classification”, Mycological Society of America (MSA) annual meeting, Minneapolis, MN, USA, August, 2019.
C. Gondhalekar, B. Rajwa, E. Bae, V. Patsekin, J. Sturgis, H. Kim, I.J. Doh, P. Diwakar, and J.P. Robinson, “Multiplexed detection of lanthanides using laser-induced breakdown spectroscopy: a survey of data analysis techniques”, Proceedings of SPIE, 1101609, Washington, DC, USA, April, 2019.
I.J. Doh, H.J. Min, C. Coronel-Aguilera, T. Lim, B. M. Applegate, and E. Bae, “Portable bioluminescence detection for food safety: smartphone vs. silicon photomultiplier”, Proceedings of SPIE, 110160E, Washington, DC, USA, April, 2019.
V. Patsekin, S. On, J. Sturgis, E. Bae, B. Rajwa, A. Patsekin, and J.P. Robinson, “Classification of Arcobacter species using variational autoencoders”, Proceedings of SPIE, 110168, Washington, DC, USA, April, 2019.
Y. Jung, Y. Heo, A. Deering, and E. Bae, “Smartphone-based quantitative reader for detection of food-borne bacteria by lateral flow assay”, Proceedings of SPIE, 108691A, San Francisco, CA, USA, February, 2019.
I.J. Doh, H. Kim, J. Sturgis, V. Patsekin, J.P. Robinson, and E. Bae, “Development of multi-modal bacterial rapid detection instrument”, Frontiers in Optics, JTu2A, Washington, DC, USA, September, 2018.
Y. Jung, C Coronel-Aguilera, B.M. Applegate, and E. Bae, “Smartphone-based bioluminescence detection for food safety: Current status and future perspective”, 28th World Congress on Biosensors, Miami, FL, USA, June, 2018.
D.V. Sarria-Zuniga, E. Bae, A. Deering, M. Aime, J. P. Robinson, and R. Pruitt, “Culturable bacterial communities of romaine lettuce leaves and application of a new optical scattering technology (BEAM) for their characterization”, American Society of Microbiology (ASM) general meeting, Atlanta, GA, USA, June, 2018.
C Coronel-Aguilera, and E. Bae, “Detection of Escherichia coli O157:H7 using smartphone-based luminometry”, 20th International Symposium on Bioluminescence & Chemiluminescence, Nantes, France, May, 2018.
B. Rajwa, E. Bae, V. Patsekin, K. Hammac, and, J. P. Robinson, “Reducing RISK of Pathogen Misclassification through application of ELS-GUIDED SAMPLING”, Recent Advances in Food Analysis (RAFA), Prague, Czech republic, November, 2017.
J. P. Robinson, K. Hamack, E. Bae, R.P. Eberle, J. Osterhus, S. Nadir, J. Sturgis, V. Patsekin, and B. Rajwa, “Elastic Light Scatter (ELS) and MALDI-TOF: Complementary technologies for reducing false negatives”, Recent Advances in Food Analysis (RAFA), Prague, Czech republic, November, 2017.
J. P. Robinson, C. Gondhalekar, E. Bae, B. Rajwa, “Field-Deployable Laser-Induced-Breakdown-Spectroscopy for Multiplexed Detection of Food Contaminants Using Heavy-Metal Labeled Antibodies Embedded in a Lateral Flow Strip”, Recent Advances in Food Analysis (RAFA), Prague, Czech republic, November, 2017.
Y. Jung, H.W. Kim, Y.H.B. Kim, and E. Bae, “Design of smartphone-based spectrometer to assess fresh meat color”, Proceedings of SPIE, 1007213, San Francisco, CA, USA, February, 2017.
Y. Jung, I.J. Doh, and E. Bae, “Pico-watt radiant flux detection by smartphone”, Frontiers in Optics, JTh2A, Rochester, NY, USA, October, 2016.
C. Gondhalekar, E. Biela, B. Rajwa, E. Bae, V. Patsekin, J. Sturgis, H. Kim, I.J. Doh, L. Stanker, and J.P. Robinson, “Establishing the basis for quantitative spark-induced breakdown spectroscopy (SIBS) toxin detection technology”, Biomedical Engineering Society annual meeting, Th-430, Minneapolis, MN, USA, October, 2016.
J. P. Robinson, E. Bae, J. Strugis, B. Rajwa, V. Patsekin, "Bacterial identification can be achieved from a colony in seconds without reagents", Food Micro, Dublin, Ireland, July, 2016.
E. Bae, I.-J. Doh, J. Strugis, B. Rajwa, V. Patsekin, J. P. Robinson, "Biophotonics of bacterial colony screening and identification using coherent light source", Food Micro, Dublin, Ireland, July, 2016.
B. Rajwa, E. Bae, V. Patsekin, J. P. Robinson, "Reducing the risk of bacterial contamination by application of machine-learning methods for phenotypic pre-screening, recognition and classification", Food Micro, Dublin, Ireland, July, 2016.
H. Kim, I.-J. Doh, E. Biel, C. Gondhalekar, B. Rajwa, V. Patsekin, E. Bae, P. Diwakar, L. Stanker, J. P. Robinson, "Laser induced breakdown spectroscopy (LIBS) using lanthanide tagged bio-molecules", International Society of Analytical Cytology (ISAC), Seattle, WA, June, 2016.
H. Kim, I.-J. Doh, E. Biel, C. Gondhalekar, B. Rajwa, V. Patsekin, E. Bae, P. Kulkani, J. P. Robinson, "A portable atomic spectrometer using electrical spark and metal-conjugated biomolecules", International Society of Analytical Cytology (ISAC), Seattle, WA, June, 2016.
C. Gondhalekar, E. Biela, B. Rajwa, E. Bae, V. Patsekin, J. Sturgis, H. Kim, I.-J. Doh, L. Stanker, J. P. Robinson, "Development of Calibration Standards for multiplexed detection of biological and chemical food contaminants using spark-induced breakdown spectroscopy (SIBS)", International Society of Analytical Cytology (ISAC), Seattle, WA, June, 2016.
B. Rajwa, A. Irvine, E. Bae, V. Patsekin, J. P. Robinson, M. Dundar, "Machine-learning methods for screening, recognition and classification of bacteria on the basis of elastic light scattering characteristics", Society for Laboratory Automation and Screening (SLAS), San Diego, CA, 2016.
E. Bae, H. Kim, J. Sturgis, B. Rajwa, V. Patsekin, J. P. Robinson, "Phenotyping of bacterial colonies from the biophotonics perspective: The fundamentals of pathogen detection", Recent Advance in Food Analysis (RAFA), Prague, Czech republic, 2015.
J. P. Robinson, E. Bae, J. Sturgis, B. Rajwa, V. Patsekin, M. Bogdanov, "A rapid, label-free technology for microbial identification for food-borne pathogens", Recent Advance in Food Analysis (RAFA), Prague, Czech republic, 2015.
B. Rajwa, A. Irvine, M. Dundar, E. Bae, V. Patsekin, J. P. Robinson, "Application of machine-learning methods to recognition and classification of foodborne pathogens on the basis of elastic light scattering characteristics", Recent Advance in Food Analysis (RAFA), Prague, Czech republic, 2015.
V. Patsekin, J. Sturgis, B. Rajwa, E. Bae, J. P. Robinson, "A software-hardware system for detection and Identification of pathogens", Recent Advance in Food Analysis (RAFA), Prague, Czech republic, 2015.
A. K. Singh, X. Bai, L. Leprun , Z. Tang, H. Kim, R. Drolia, E. Bae, B. Applegate, and A. K. Bhunia, "Laser scatterometer, a novel optical sensing tool to screen mutation in virulence associated genes in Listeria monocytogenes", Institute of Food Technologist (IFT), Chicago, IL, 2015.
H. Kim, I.-J. Doh, A. K. Singh, A. K. Bhunia, J. P. Robinson, and E. Bae, "Development of an integrated multimodal instrument for bacterial colony analysis", Laser technology, Orlando FL, 2015.
I.-J. Doh, H. Kim, and E. Bae, "Towards a portable confocal Raman module for sample identification and quantification", Laser technology, Orland FL, 2015.
H. Kim, I.-J. Doh, A. K. Singh, A. K. Bhunia, J. P. Robinson, and E. Bae, "Development of reflection type laser scatterometer for bacterial colony analysis", International Conference on Biomedical Engineering and Biotechnology (ICBEB), Shanghai, China, 2015.
Y. H. Ro, J. Kim, H. Kim, I.-J. Doh, J. P. Robinson, and E. Bae, "Development of smartphone based fluorometer for a portable instrument", International Conference on Biomedical Engineering and Biotechnology (ICBEB), Shanghai, China, 2015.
H. Kim, I.-J. Doh, G. B. King, A.K. Bhunia, and E. Bae "Experimental verification of multispectral forward scatter phenotyping from bacterial colonies", Frontiers in Optics, Tucson, Arizona, USA, 2014.
H. Kim, G. B. King, A.K. Bhunia, and E. Bae "Understanding the multispectral forward scatter patterns by diffraction theory", Frontiers in Optics, Tucson, Arizona, USA, 2014.
A.K. Singh, X. Sun, H. Kim, M. Abdelhaseib, E. Bae, A.K. Bhunia "Real-Time, On-Plate Rapid Detection and Identification of Bacillus cereus-group using Light Scattering Sensor", American Society of Microbiology, Denver, CO, USA, 2013.
M. Abdelhaseib, M.A. Roshini Amalaradjou, A.K. Singh, E. Bae, A.K. Bhunia "Optical sensor and immunoassay based detection of Salmonella serovars",7th International Conference for Food safety, Chicago, IL, USA, 2012.
L. Leprun, M.A. Roshini Amalaradjou, H. Kim, A.K. Singh, E. Bae, A.K. Bhunia "Signature scatter based detection of Listeria monocytogenes from food sample",7th International Conference for Food safety, Chicago, IL, USA, 2012.
H. Kim, G.B. King, A.K. Bhunia, and E. Bae "Prediction and Experimental Validation of Forward Scattering Patterns for Bacillus Species",7th International Conference for Food safety, Chicago, IL, USA, 2012.
A.K. Singh, A.M. Bettasso, E. Bae, B. Rajwa, M.M. Dundar, J.P. Robinson, E.D. Hirleman, and A.K. Bhunia "A label-free on-plate colony-identification of Salmonella enterica serovar using laser optical sensor",7th International Conference for Food safety, Chicago, IL, USA, 2012.
Huisung Kim, Galen B. King, Arun K. Bhunia, and Euiwon Bae Modeling of Multi-spectral Forward Light Scattering Patterns from Bacterial Colonies, Frontier in Optics 2012 (FiO 2012), Rochester, Newyork, USA, 2012.
J.P. Robinson, B.P. Rajwa, E. Bae, V.Patsekin, A.M. Roumani, A.K. Bhunia, J.E. Dietz, V.J. Davisson, M.M. Dundar, J. Thomas, and E.D. Hirleman "Rapid Microbe Colony Identification by Optical Scattering", Lasers and Interactions wiht Paricle (LIP), INSA de Rouen, France, 2012.
D. Ying, E. Bae, B. Rajwa, V.J. Davisson, A. Bhunia, V. Patsekin, J.P. Robinson "Development of portable bacterial identification system", Institute of biological engineering (IBC), Indianapolis, Indiana, USA, 2012.
W. L. Slone, C.L. Waters, L. Corum, J.P. Robinson, E. Bae, and J.G. Thomas "Integrating Optical Scatter Technology to Define Microbial Pathogenesis in Wounds", Symposium on Advanced Wound Care (SWAC), Las Vegas, Nevada, USA, 2011.
W. L. Slone, E. Bae, C.L. Waters, J.G. Thomas, J.P. Robinson, and H.M Motlagh "Applying Optical Scatter Technology (BARDOT) to Rapidly Unmask and Map Resistant Profiles in Wound Surveillance", Symposium on Advanced Wound Care (SWAC), Las Vegas, Nevada, USA, 2011.
J.P Robinson, D. Kramer, V. Patsekin, C. Holdman, J. Sturgis, and E. Bae, "A Low Cost Device for Bacterial Identification Useful for Resource-Limited Regions", 26th Congress of the International Society for Advancement of Cytometry (ISAC), B151, #279, Baltimore, Maryland, USA, 2011.
J.P Robinson, V. Patsekin, D. Kramer, C. Holdman, R. Ratig, J. Sturgis, A.K Bhunia, J.E. Dietz, E. Bae, and V.J. Davisson, "A Biodefense-driven approach to bacterial identification in the Clinical Environment", 26th Congress of the International Society for Advancement of Cytometry (ISAC), B153, #281, Baltimore, Maryland, USA, 2011.
A. Fleishman Littlejohn, A. Bigando, E. Bae, and A.K. Bhunia, "Light-scattering Sensor for Real-time Identification of Vibrio parahaemolyticus and V. vulnificus colonies", 11th General meeting for American Society for Microbiology, #1338, New Orleans, Louisiana, USA, 2011.
Y. Tang, A. Singh, E. Bae, E.D. Hirleman, and A.K. Bhunia, "Differentiation of Serovars of Escherichia coli colonies using optical forward-scattering sensor", 11th General meeting for American Society for Microbiology, #1348, New Orleans, Louisiana, USA, 2011
B. Rajwa, M. M. Dundar, F. Akova, V. Patsekin, E. Bae, Y. Tang, J.E. Dietz, E.D. Hirleman, J. P. Robinson, and A.K Bhunia, “Digital microbiology: detection and classification of unknown bacterial pathogens using a label-free laser light scatter-sensing system”, Proceedings of SPIE, 8029, 2011.
N. Bai, Y. Tang, A.K Bhunia, E.D. Hirleman, and E. Bae, Characterization of optical properties of bacterial micro-colonies via the comprehensive morphology analyzer”, Proceedings of SPIE, 8027, 2011.
N. Bai, E. Bae, A. Aroonnual, A.K Bhunia, J.P. Robinson and E.D. Hirleman, Morphology characterization of bacterial colonies for predicting forward scattering patterns”, OSA Optics and Photonics Congress,, Karlsruhe, Germany, 2010.
E. Bae, N. Bai, A. Aroonnual, A.K Bhunia, J.P. Robinson and E.D. Hirleman, “Prediction of the light scattering patterns from bacterial colonies by a time-resolved Reaction-diffusion model and scalar diffraction theory”, Proceedings of SPIE, 7315, 2009.
N. Bai, E. Bae, A. Aroonnual, A.K Bhunia, J.P. Robinson and E.D. Hirleman, “Development of a real-time system of monitoring the bacterial growth and registering the forward scattering pattern”, Proceedings of SPIE, 7315, 2009.
B. Rajwa, M. Dundar, V. Patsekin, K. Huff, A. K. Bhunia, M. Venkatapathi, E. Bae, E.D. Hirleman, and J.P. Robinson, “Morphotypic analysis and classification of bacteria and bacterial colonies using laser light-scattering, pattern recognition, and machine-learning system”, Proceedings of SPIE, 7306, 2009.
E. Bae, P.P. Banada, A.K Bhunia, and E.D. Hirleman, Label-free detection of multiple bacterial pathogens using light scattering sensor”, 21st International Committee on Food Microbiology and Hygiene, P158, 2008.
E. Bae, P.P. Banada, A.K Bhunia, and E.D. Hirleman, “Development and optimization of two-dimensional centering algorithm for the bacteria rapid detection using optical scattering technology (BARDOT) platform”, Proceedings of SPIE, 6849, 2008.
B. Rajwa, B. Bayraktar, P.P. Banada, K. Huff, E. Bae, E.D. Hirleman, A.K Bhunia, and J.P. Robinson, Phenotypic analysis of bacterial colonies using laser light scatter and pattern-recognition techniques”, Proceedings of SPIE, 6864, 2008.
B. Rajwa, B. Bayraktar, P.P. Banada, K. Huff, E. Bae, E.D. Hirleman, A.K Bhunia, and J.P. Robinson, “Noninvasive forward-scattering system for rapid detection, characterization, and identification of bacterial colonies”, Proceedings of SPIE, 6554, 2007.
K. Huff, P.P. Banada, E. Bae, B. Bayraktar, B. Rajwa, J.P. Robinson, E.D. Hirleman, G.P. Richard, and A.K Bhunia, “Detection and identification of foodborne pathogens in genus and species levels using a noninvasive modified light scatterometer-BARDOT”, General Meeting of the American Society for Microbiology, V:106, 455-456, 2006.
E. Bae, P.P. Banada, A.K Bhunia, and E.D. Hirleman, “Bio-physical modeling of time-resolved forward scattering by Listeria colonies”, Proceedings of SPIE, 6381, 2006.
B. Rajwa, B. Bayraktar, P.P. Banada, K. Huff, E. Bae, E.D. Hirleman, A.K Bhunia, and J.P. Robinson, Noninvasive forward-scattering system for rapid detection, characterization, and identification of Listeria colonies: image-processing and data analysis”, Proceedings of SPIE, 6381, 2006.
E.W. Bae, J.A. Kim, S.H. Kim, and Y.K. Kwak, “Micro-motion measurement systems for milli-structure using diffraction grating”, Proceedings of SPIE, 4190, 71-79, 2001.
J.A. Kim, K.C. Kim, E.W. Bae, S.H. Kim, and Y.K. Kwak, “Micro-motion measurement systems for milli-structure using diffraction grating”, Proceedings of SPIE, 3945, 150-157, 2000.
J.A. Kim, K.C. Kim, E.W. Bae, S.H. Kim, and Y.K.Kwak, “Six-degree-of-freedom displacement sensing method using a diffraction grating as a cooperative target”, IEEE instrumentation and Measurement technology conference, 582-586, 2000.
Book Chapter
E. Bae and A.K. Bhunia "Label-free light scattering sensors for high throughput screening of microbes and toxins in food", High throughput screening for food safety assessment: biosensor technologies, hyperspectral imaging and practical applications, A.K. Bhunia, M.S. Kim, C.R. Taitt (ed), Woodhead Publishing, Cambridge, UK, 2012 (in press)
A.K.Bhunia and E. Bae “Harnessing nano-optical Sensors for food safety and security”, Optochemical nanosensors, Michele Giordano (ed), Talyor & Francis Group, New York, pp. 491-506, 2012
A.K. Bhunia, E. Bae, B. Rajwa, J.P. Robinson, and E.D. Hirleman “Utilization of optical forward scatter image biological database: food-borne pathogen colony differentiation and detection”, Omics and Biometrics in Food safety, Xianghe Yan, Vijay Juneja, Lihan Huang (ed), DEStech Publications, Inc,. Lancaster, PA 2010, pp553-572, 2011
A.K. Bhunia, V. Nanduri, E. Bae, and E.D. Hirleman “Biosensors, Foodborne Pathogen Detection”, Encyclopedia of Industrial Biotechnology: Bioprocess, Bioseparation, and Cell Technology Flickinger, M.C. (ed), John Wiley &Sons, Inc,. Hoboken, NJ, pp1-8, 2009
Patents
E. Bae, H. Kim, “System architecture and method of processing an image therin”, US application, 16/175,752.
J.P. Robinson, B. Rajwa, K.E. Ragheb, C.M. Holdman, V. Patsekin, E. Bae “Culture imaging system”, US application, 15/565,404.
J.P. Robinson, B. Rajwa, V. Patsekin, E. Bae “Metal-antibody tagging and plasma-based detection”, US10,514,338.
J.P. Robinson, B. Rajwa, V. Patsekin, E. Bae “Metal-antibody tagging and plasma-based detection”, US10,451,556.
E. Bae, A. K. Bhunia, E. D. Hirleman, H. Kim, B. Rajwa, J.P. Robinson, and V. Patsekin “Organism identification”, US 15/515,499.
J.P. Robinson, B. Rajwa, B. Bayraktar, A.K. Bhunia, E.D. Hirleman, E. Bae, “System and Method for Organism Identification”, US8,787,633.
E.D. Hirleman, S. Guo, A.K. Bhunia, E. Bae, “System and Method for Rapid Detection and Characterization of Bacterial Colonies Using Forward Light Scattering”, US7,465,560.
