{"id":72,"date":"2018-11-06T04:02:26","date_gmt":"2018-11-06T04:02:26","guid":{"rendered":"https:\/\/engineering.purdue.edu\/ramkiites\/?page_id=72"},"modified":"2025-04-17T00:54:47","modified_gmt":"2025-04-17T00:54:47","slug":"group-seminar","status":"publish","type":"page","link":"https:\/\/engineering.purdue.edu\/ramkiites\/group-seminar\/","title":{"rendered":"Group Seminar"},"content":{"rendered":"\n
\n Presenter<\/strong> \n <\/td>\n Presentation Title<\/strong> \n <\/td>\n Date<\/strong> \n <\/td><\/tr>
Yongseok Choi<\/td>Mathematical Modeling of Dynamic Regulation in Biological Systems<\/td>04\/04\/2025<\/td><\/tr>
Prateek Gupta<\/td>An integrative model for incorporating cellular metabolism and signaling molecules<\/td>3\/15\/2024<\/td><\/tr>
Sana Khanum <\/td>Modeling enzyme competition in Eicosanoid metabolism in macrophage cells using a cybernetic framework<\/td>03\/01\/2024<\/td><\/tr>
Prateek Gupta<\/td>Cybernetic modeling of eukaryotes<\/td>02\/02\/2024<\/td><\/tr>
Sana Khanum<\/td>Modeling inflammatory response in mouse macrophages: Cybernetic model & information\u00ad-theoretic approaches<\/td>01\/19\/2024<\/td><\/tr>
Pelin Bulutoglu<\/td>Stochastic nucleation of polymorphs<\/td>06\/04\/2021<\/td><\/tr>
Dr. Rubesh Raja<\/td>Cybernetic model for transcriptional regulation during the mammalian cell cycle <\/td>05\/28\/2021<\/td><\/tr>
Dr. Shiyan Wang<\/td>Literature review on antimicrobial transfer<\/td>05\/14\/2021<\/td><\/tr>
Sana Khanum<\/td>Research update<\/td>05\/10\/2021<\/td><\/tr>
Pelin Bulutoglu<\/td>Nucleation of NaCl from solution \u2013 Dynamics and Thermodynamics<\/td>04\/30\/2021<\/td><\/tr>
Dr. Rubesh Raja<\/td> Cybernetic modeling of eicosanoid metabolism in BMDM cells incorporating M1\/M2 transitions <\/td>04\/16\/2021<\/td><\/tr>
Dr. Shiyan Wang<\/td>Research update<\/td>04\/09\/2021<\/td><\/tr>
Sana Khanum<\/td>Research update<\/td>04\/02\/2021<\/td><\/tr>
Akancha Pandey<\/td> Modeling of hydroxyurea based treatment of sickle cell disease <\/td>03\/22\/2021<\/td><\/tr>
Pelin Bulutoglu<\/td>APS Practice talk<\/td>03\/12\/2021<\/td><\/tr>
Pelin Bulutoglu<\/td> A summary of available methods to calculate nucleation rates <\/td>02\/19\/2021<\/td><\/tr>
Akancha Pandey<\/td>Modeling of hydroxyurea based treatment of sickle cell disease<\/td>02\/05\/2021<\/td><\/tr>
Dr. Rubesh Raja<\/td>Cybernetic modeling of eicosanoid metabolism in BMDM cells incorporating M1\/M2 transitions<\/td>01\/29\/2021<\/td><\/tr>
Sana Khanum<\/td>Research update<\/td>01\/22\/2021<\/td><\/tr>
Sana Khanum<\/td>Research update<\/td>12\/18\/2020<\/td><\/tr>
Pelin Bulutoglu<\/td>Research update<\/td>12\/11\/2020<\/td><\/tr>
Akancha Pandey<\/td>Research update<\/td>12\/04\/2020<\/td><\/tr>
Dr. Shiyan Wang<\/td>Research update<\/td>11\/20\/2020<\/td><\/tr>
Dr. Rubesh Raja<\/td>Research update<\/td>11\/09\/2020<\/td><\/tr>
Sana Khanum<\/td>Mutual information between cytokine secretion and eicosanoid metabolism during inflammation<\/td>10\/23\/2020<\/td><\/tr>
Pelin Bulutoglu<\/td>An atomic level perspective on the mechanism of NaCl nucleation from highly concentrated solutions<\/td>10\/16\/2020<\/td><\/tr>
Lina Aboulmouna<\/td>Thesis defense practice<\/td>10\/09\/2020<\/td><\/tr>
Akancha Pandey<\/td>Modeling of hydroxyurea based treatment of sickle cell disease<\/td>10\/02\/2020<\/td><\/tr>
Lina Aboulmouna <\/td>Cybernetic multi-objective modeling of the Eicosanoid pathway in macrophages<\/td>09\/18\/2020<\/td><\/tr>
Sana Khanum<\/td>Research update<\/td>08\/28\/2020<\/td><\/tr>
Dr. Rubesh Raja<\/td>Cybernetic modeling of eicosanoid metabolism in BMDM cells incorporating M1\/M2 transitions<\/td>08\/07\/2020<\/td><\/tr>
Dr. Shiyan Wang<\/td>Exact sampling of polymer conformations using Brownian bridges<\/td>07\/31\/2020<\/td><\/tr>
Pelin Bulutoglu<\/td>Nucleation of NaCl in concentrated solutions: Mechanism and rate<\/td>07\/10\/2020<\/td><\/tr>
Kunaal Joshi<\/td>Cell size homeostasis<\/td>07\/03\/2020<\/td><\/tr>
Sana Khanum<\/td>Multiobjective function and mutual information theory<\/td>06\/26\/2020<\/td><\/tr>
Akancha Pandey<\/td>Research update<\/td>06\/19\/2020<\/td><\/tr>
Dr. Rubesh Raja<\/td>Macrophages and recovery from acute and chronic inflammation<\/td>06\/05\/2020<\/td><\/tr>
Pelin S Bulutoglu<\/td>Classical nucleation theory approach to two-step nucleation of crystals<\/td>05\/29\/2020<\/td><\/tr>
Akancha Pandey<\/td>Need for personalized model-based approach for hydroxyurea treatment of sickle cell disease<\/td>05\/22\/2020<\/td><\/tr>
Sana Khanum<\/td>COX Inhibitors: Non-Steroidal Anti-Inflammatory Drugs (NSAIDs)<\/td>05\/15\/2020<\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n A preview of Covid19, Cytokine\n Storm, and Cybernetic modeling of the inflammatory response\n <\/td>\n 05\/08\/2020\n <\/td><\/tr>
\n Naseeha Mohammed, Rubesh Raja\n <\/td>\n Research updates\n <\/td>\n 05\/01\/2020\n <\/td><\/tr>
\n Pelin S Bulutoglu\n <\/td>\n Unraveling the mechanism of\n glycine nucleation from solution using molecular simulations – A step towards\n polymorph selection\n <\/td>\n 04\/17\/2020\n <\/td><\/tr>
\n Akancha Pandey\n <\/td>\n Research update\n <\/td>\n 04\/10\/2020\n <\/td><\/tr>
\n Sana Khanum\n <\/td>\n Inflammation and the immune system\n <\/td>\n 04\/03\/2020\n <\/td><\/tr>
\n Prof. Ramkrishna\n <\/td>\n Towards modeling of\n differentiation of stem cells to neurons on a patch\n <\/td>\n 03\/27\/2020\n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n Two roads diverged in a wood…\n <\/td>\n 03\/13\/2020\n <\/td><\/tr>
\n Parul Verma\n <\/td>\n Defense practice talk\n <\/td>\n 02\/28\/2020\n <\/td><\/tr>
\n Rubesh Raja\n <\/td>\n Research update\n <\/td>\n 02\/21\/2020\n <\/td><\/tr>
\n Pelin S Bulutoglu\n <\/td>\n Prelim practice talk\n <\/td>\n 02\/14\/2020\n <\/td><\/tr>
\n Akancha Pandey\n <\/td>\n Research update\n <\/td>\n 02\/07\/2020\n <\/td><\/tr>
\n Parul Verma\n <\/td>\n A mathematical investigation of\n chemotherapy-induced peripheral neuropathy\n <\/td>\n 01\/24\/2020\n <\/td><\/tr>
\n Pelin S Bulutoglu\n <\/td>\n Unraveling the mechanism of\n glycine nucleation from solution using molecular simulations – A step towards\n polymorph selection\n <\/td>\n 01\/17\/2020\n <\/td><\/tr>
\n Anthony\n Thomas Vukovich, Rubesh Raja\n <\/td>\n Research\n updates\n <\/td>\n 12\/05\/2019\n <\/td><\/tr>
\n Lina\n Aboulmouna, Parul Verma\n <\/td>\n AIChE\n practice talks\n <\/td>\n 11\/07\/2019\n <\/td><\/tr>
\n Parul\n Verma, Akancha Pandey\n <\/td>\n AIChE\n practice talks\n <\/td>\n 10\/31\/2019\n <\/td><\/tr>
\n Pelin S\n Bulutoglu\n <\/td>\n A\n multidimensional free energy approach for polymorph selection in crystallization\n of glycine from solution\n <\/td>\n 10\/24\/2019\n <\/td><\/tr>
\n Kunaal Joshi \n <\/td>\n The\n evolution of cells\u2019 decision to divide\n <\/td>\n 10\/18\/2019\n <\/td><\/tr>
\n Akancha\n Pandey\n <\/td>\n Research\n update and future directions\n <\/td>\n 10\/11\/2019\n <\/td><\/tr>
\n Lina Aboulmouna\n <\/td>\n Research\n update and future directions\n <\/td>\n 10\/04\/2019\n <\/td><\/tr>
\n Rubesh\n Raja\n <\/td>\n HCV\n treatment dilemma: Connections with cancer\n <\/td>\n 09\/13\/2019\n <\/td><\/tr>
\n Pelin S\n Bulutoglu\n <\/td>\n Research\n update\n <\/td>\n 08\/22\/2019\n <\/td><\/tr>
\n Akancha Pandey \n <\/td>\n Modeling\n hydroxyurea dynamics to improve Sickle Cell Disease treatment\n <\/td>\n 08\/16\/2019\n <\/td><\/tr>
\n Lina Aboulmouna\n <\/td>\n A\n Cybernetic Approach to Modeling Lipid Metabolism in Mammalian Cells\n <\/td>\n 08\/02\/2019\n <\/td><\/tr>
\n Parul\n Verma\n <\/td>\n On\n exploring pain. Does dynamical theory have a role in understanding it\n <\/td>\n 07\/26\/2019\n <\/td><\/tr>
\n Pelin S\n Bulutoglu\n <\/td>\n Unraveling\n the mechanism of nucleation from solution using molecular simulations – A\n step towards polymorph prediction\n <\/td>\n 07\/19\/2019\n <\/td><\/tr>
\n Rubesh Raja \n <\/td>\n Optimizing HCV Treatments \n <\/td>\n 07\/11\/2019 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n Using dynamical systems theory to\n investigate electrophysiology of a nociceptive neuron \n <\/td>\n 06\/07\/2019 \n <\/td><\/tr>
\n Akancha Pandey \n <\/td>\n Research update \n <\/td>\n 05\/31\/2019 \n <\/td><\/tr>
\n Rubesh Raja \n <\/td>\n A mathematical model of HIV\n treatment using broadly neutralizing antibodies \n <\/td>\n 05\/24\/2019 \n <\/td><\/tr>
\n Rubesh Raja \n <\/td>\n Modelling and optimization of\n novel therapies for hepatitis C virus (HCV) and HIV infections \n <\/td>\n 05\/10\/2019 \n <\/td><\/tr>
\n Pelin S Bulutoglu \n <\/td>\n Hybrid MD\/MC for polymorph\n selection & estimation of aggregation frequency in an agitated filter\n dryer \n <\/td>\n 04\/26\/2019 \n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n A cybernetic approach to modeling\n lipid metabolism in mammalian systems \n <\/td>\n 04\/19\/2019 \n <\/td><\/tr>
\n Kunaal Joshi \n <\/td>\n Cell Size Homeostasis in C.\n Crescentus \n <\/td>\n 04\/05\/2019 \n <\/td><\/tr>
\n Akancha Pandey \n <\/td>\n Mathematical Modeling Approach to\n Rescue Sickle Cell Disease Patients \n <\/td>\n 02\/28\/2019 \n <\/td><\/tr>
\n Dr. Sri Iyer-Biswas \n <\/td>\n Emergent rules governing\n stochastic individual cell dynamics \n <\/td>\n 02\/08\/2019 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n A mathematical investigation of\n chemotherapy induced peripheral neuropathy \n <\/td>\n 02\/01\/2019 \n <\/td><\/tr>
\n Pelin S Bulutoglu \n <\/td>\n String method for polymorph\n selection in crystallization of glycine from solution \n <\/td>\n 01\/25\/2019 \n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n Information Theoretic Approach to\n Complex Biological Network Reconstruction: Application to cytokine release in\n RAW 264.7 macrophages \n <\/td>\n 01\/18\/2019 \n <\/td><\/tr>
\n Akancha Pandey \n <\/td>\n Pharmacokinetic \u2013 Pharmacodynamic\n Modeling of Hydroxyurea \n <\/td>\n 12\/07\/2018 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n Integrative Mathematical Model to\n Investigate Chemotherapy Induced Peripheral Neuropathy through a Mechanistic\n Study of Neuronal Dynamics \n <\/td>\n 10\/26\/2018 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n Pharmacometabonomics Approach for\n Early Prediction of Chemotherapy Induced Peripheral Neuropathy \n <\/td>\n 10\/19\/2018 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n Dynamical systems analysis of\n peripheral neuropathy \n <\/td>\n 10\/12\/2018 \n <\/td><\/tr>
\n Pelin S Bulutoglu \n <\/td>\n Qualifier Practice Talk \n <\/td>\n 09\/26\/2018 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n Dynamical systems analysis of a\n simple pain model \n <\/td>\n 09\/21\/2018 \n <\/td><\/tr>
\n Ming-Hsu Chen \n <\/td>\n Modeling of Inulin Consumption by\n Microbial Communities \n <\/td>\n 09\/07\/2018 \n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n Prelim Practice Talk \n <\/td>\n 08\/31\/2018 \n <\/td><\/tr>
\n Pelin S Bulutoglu \n <\/td>\n Research Progress \n <\/td>\n 08\/24\/2018 \n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n Current Research Efforts and\n Future Directions \n <\/td>\n 08\/03\/2018 \n <\/td><\/tr>
\n Ming-Hsu Chen \n <\/td>\n Mechanistic modeling of\n inulin consumption by microbial communities \n <\/td>\n 07\/06\/2018 \n <\/td><\/tr>
\n Pelin S Bulutoglu \n <\/td>\n Theoretical Quest to Crystal\n Polymorphs \n <\/td>\n 06\/29\/2018 \n <\/td><\/tr>
\n Akancha Pandey \n <\/td>\n Research Progress \n <\/td>\n 06\/15\/2018 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n Pharmacometabonomics Approach for\n Early Prediction of Chemotherapy Induced Peripheral Neuropathy \n <\/td>\n 06\/08\/2018 \n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n A Cybernetic Approach to Model\n Lipid Metabolism in a Mammalian System \n <\/td>\n 06\/01\/2018 \n <\/td><\/tr>
\n Pelin S Bulutoglu \n <\/td>\n Research Progress \n <\/td>\n 05\/25\/2018 \n <\/td><\/tr>
\n Akancha Pandey \n <\/td>\n Research Progress \n <\/td>\n 05\/11\/2018 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n Mathematical model to investigate\n chemotherapy induced peripheral neuropathy through mechanistic study of\n neuronal dynamics \n <\/td>\n 04\/27\/2018 \n <\/td><\/tr>
\n Alan Min \n <\/td>\n Deconvoluting Epigenetic Effects \n <\/td>\n 04\/13\/2018 \n <\/td><\/tr>
\n Pelin S Bulutoglu \n <\/td>\n Research progress \n <\/td>\n 04\/06\/2018 \n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n A tale of two models: Modeling\n lipid metabolism in a mammalian system \n <\/td>\n 03\/30\/2018 \n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n A tale of two models: Modeling\n lipid metabolism in a mammalian system \n <\/td>\n 03\/23\/2018 \n <\/td><\/tr>
\n Akancha Pandey \n <\/td>\n Non-Compliance in Hydroxyurea\n Treatment \n <\/td>\n 03\/16\/2018 \n <\/td><\/tr>
\n Parul Verma \n <\/td>\n A Mathematical Modeling Approach\n to Investigate Chemotherapy Induced Peripheral Neuropathy (CIPN) \n <\/td>\n 02\/23\/2018 \n <\/td><\/tr>
\n Vu Tran \n <\/td>\n Thesis defense practice talk \n <\/td>\n 02\/19\/2018 \n <\/td><\/tr>
\n Pelin S Bulutoglu \n <\/td>\n Theoretical Quest to Crystal\n Polymorphs \n <\/td>\n 02\/09\/2018 \n <\/td><\/tr>
\n Lina Aboulmouna \n <\/td>\n A tale of two models: Modeling\n lipid metabolism in mammalian systems \n <\/td>\n 02\/02\/2018 \n <\/td><\/tr>
\n Akancha Pandey \n <\/td>\n An App for Sickle Cell Disease \n <\/td>\n 01\/26\/2018 \n <\/td><\/tr><\/tbody><\/table><\/figure>\n\n\n\n

<\/p>\n","protected":false},"excerpt":{"rendered":"

Presenter Presentation Title Date Yongseok Choi Mathematical Modeling of Dynamic Regulation in Biological Systems 04\/04\/2025 Prateek Gupta An integrative model for incorporating cellular metabolism and…<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"ngg_post_thumbnail":0},"_links":{"self":[{"href":"https:\/\/engineering.purdue.edu\/ramkiites\/wp-json\/wp\/v2\/pages\/72"}],"collection":[{"href":"https:\/\/engineering.purdue.edu\/ramkiites\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/engineering.purdue.edu\/ramkiites\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/engineering.purdue.edu\/ramkiites\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/engineering.purdue.edu\/ramkiites\/wp-json\/wp\/v2\/comments?post=72"}],"version-history":[{"count":54,"href":"https:\/\/engineering.purdue.edu\/ramkiites\/wp-json\/wp\/v2\/pages\/72\/revisions"}],"predecessor-version":[{"id":1478,"href":"https:\/\/engineering.purdue.edu\/ramkiites\/wp-json\/wp\/v2\/pages\/72\/revisions\/1478"}],"wp:attachment":[{"href":"https:\/\/engineering.purdue.edu\/ramkiites\/wp-json\/wp\/v2\/media?parent=72"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}